Reports and Publication

Annual Reports

Within 24 years of dedication, The Center for Tropical Medicine Universitas Gadjah Mada has played an important role in research and knowledge both nationally and globally. The COVID-19 pandemic in 2020 has pushed us to explore beyond research, but also support the local comunities to national goverment to stregthen their resilience during this challenging time.

Other annual reports

Annual reports
2019
Annual reports
2018
Annual reports
2017

Scientific Publication

  • 2012

    Akbar NA, Allende I, Balmaseda A, Coelho IC, da Cunha RV, Datta B, Devi SS, Farrar J, Gaczkowski R, Guzman MG, Harris E, Hien TT, Horstick O, Hung NT, Jaenisch T, Junghanss T, Kroeger A, Laksono IS, Lum LC, Maron GM, Martinez E, Mishra A, Ooi EE, Pleités EB, Ramirez G, Rosenberger K, Simmons CP, Siqueira JB Jr, Soria C, Tan LH, Thuy TT,. Villalobos I, Villegas E, Wills B (2012) Regarding "Dengue--how best to classify it". Clin Infect Dis 54: 1820-1821; author reply 1821-1822.

  • 2013

    Becker SL, Vogt J, Knopp S, Panning M, Warhurst DC, Polman K, Marti H, von Müller L, Yansouni CP, Jacobs J, Bottieau E, Sacko M, Rijal S, Meyanti F, Miles MA, Boelaert M, Lutumba P, van Lieshout L, N’Goran EK, Chappuis F, Utzinger J. Persistent digestive disorders in the tropics: causative infectious pathogens and reference diagnostic tests. BMC Infect Dis. 2013 Jan 24;13:37. doi: 10.1186/1471-2334-13-37. Review. PubMed PMID: 23347408; PubMed Central PMCID: PMC3579720.

    Badurdeen S, Valladares DB, Farrar J, Gozzer E, Kroeger A, Kuswara N, Ranzinger SR, Tinh HT, Leite P, Mahendradhata Y, Skewes R, Verrall A (2013) Sharing experiences: towards an evidence based model of dengue surveillance and outbreak response in Latin America and Asia. BMC Public Health 13: 607.

    Farrar JJ, Hien TT, Horstick O, Hung NT, Jaenisch T, Junghanns T, Kroeger A, Laksono IS, Lum L, Martinez E, Simmons CP, Tami A, Tomashek KM, Wills BA (2013) Dogma in classifying dengue disease. Am J Trop Med Hyg 89: 198-201.

    Stahl HC, Butenschoen VM, Tran HT, Gozzer E, Skewes R, Mahendradhata Y, Runge-Ranzinger S, Kroeger A, Farlow A (2013) Cost of dengue outbreaks: literature review and country case studies. BMC Public Health 13: 1048.

  • 2015

    Polman K, Becker SL, Alirol E, Bhatta NK, Bhattarai NR, Bottieau E, Bratschi MW, Burza S, Coulibaly JT, Doumbia MN, Horié NS, Jacobs J, Khanal B, Landouré A, Mahendradhata Y, Meheus F, Mertens P, Meyanti F, Murhandarwati EH, N’Goran EK, Peeling RW, Ravinetto R, Rijal S, Sacko M, Saye R, Schneeberger PH, Schurmans C, Silué KD, Thobari JA, Traoré MS, van Lieshout L, van Loen H, Verdonck K, von Müller L, Yansouni CP, Yao JA, Yao PK, Yap P, Boelaert M, Chappuis F, Utzinger J. Erratum to: Diagnosis of neglected tropical diseases among patients with persistent digestive disorders (diarrhoea and/or abdominal pain ≥14 days): a multi-country, prospective, non-experimental case-control study. BMC Infect Dis. 2015 Nov 4;15:499. doi: 10.1186/s12879-015-1160-0. PubMed PMID: 26537896; PubMed Central PMCID: PMC4634142.

  • 2016

    Becker SL, Yap P, Horié NS, Alirol E, Barbé B, Bhatta NK, Bhattarai NR, Bottieau E, Chatigre JK, Coulibaly JT, Fofana HK, Jacobs J, Karki P, Khanal B, Knopp S, Koirala K, Mahendradhata Y, Mertens P, Meyanti F, Murhandarwati EH, N’Goran EK, Peeling RW, Pradhan B, Ravinetto R, Rijal S, Sacko M, Saye R, Schneeberger PH, Schurmans C, Silué KD, Steinmann P, van Loen H, Verdonck K, van Lieshout L, von Müller L, Yao JA, Boelaert M, Chappuis F, Polman K, Utzinger J. Experiences and Lessons from a Multicountry NIDIAG Study on Persistent Digestive Disorders in the Tropics. PLoS Negl Trop Dis. 2016 Nov 3;10(11):e0004818. doi: 10.1371/journal.pntd.0004818. eCollection 2016 Nov. PubMed PMID: 27812101; PubMed Central PMCID: PMC5094778.

    Jaenisch T, Tam DT, Kieu NT, Van Ngoc T, Nam NT, Van Kinh N, Yacoub S, Chanpheaktra N, Kumar V, See LL, Sathar J, Sandoval EP, Alfaro GM, Laksono IS, Mahendradhata Y, Sarker M, Ahmed F, Caprara A, Benevides BS, Marques ET, Magalhaes T, Brasil P, Netto M, Tami A, Bethencourt SE, Guzman M, Simmons C, Quyen NT, Merson L, Dung NT, Beck D, Wirths M, Wolbers M, Lam PK, Rosenberger K, Wills B (2016) Clinical evaluation of dengue and identification of risk factors for severe disease: protocol for a multicentre study in 8 countries. BMC Infect Dis 16: 120.

    Ravinetto R, Alirol E, Mahendradhata Y, Rijal S, Lutumba P, Sacko M, El-Safi S, Lim K, van Loen H, Jacobs J, Peeling RW, Chappuis F, Boelaert M. Clinical Research in Neglected Tropical Diseases: The Challenge of Implementing Good Clinical (Laboratory) Practices. PLoS Negl Trop Dis. 2016 Nov 3;10(11):e0004654. doi: 10.1371/journal.pntd.0004654. eCollection 2016 Nov. PubMed PMID: 27812089; PubMed Central PMCID: PMC5094655.

    Ravinetto R, Becker SL, Sacko M, El-Safi S, Mahendradhata Y, Lutumba P, Rijal S, Lim K, Sundar S, N’Goran EK, Verdonck K, Utzinger J, Chappuis F, Boelaert M. Governance and Standards in International Clinical Research: The Role of Transnational Consortia. Am J Bioeth. 2016 Oct;16(10):59-61. doi: 10.1080/15265161.2016.1214317. PubMed PMID: 27653405.

  • 2018

    Kristanti H, Meyanti F, Wijayanti MA, Mahendradhata Y, Polman K, Chappuis F, Utzinger J, Becker SL, Murhandarwati EEH. Diagnostic comparison of Baermann funnel, Koga agar plate culture and polymerase chain reaction for detection of human Strongyloides stercoralis infection in Maluku, Indonesia. Parasitol Res. 2018 Oct;117(10):3229-3235. doi: 10.1007/s00436-018-6021-5. Epub 2018 Aug 3. PubMed PMID: 30074085.

  • 2019

    Indriani, C., Tantowijoyo, W., Rancès, E., Andari, B., Prabowo, E., Yusdi, D., Ansari, M. R., Wardana, D. S., Supriyati, E., Nurhayati, I., Ernesia, I., Setyawan, S., Fitriana, I., Arguni, E., Amelia, Y., Ahmad, R. A., Jewell, N. P., Dufault, S. M., Ryan, P. A., Green, B. R., … Utarini, A. (2020). Reduced dengue incidence following deployments of Wolbachia-infected Aedes aegypti in Yogyakarta, Indonesia: a quasi-experimental trial using controlled interrupted time series analysis. Gates open research 4, 50. https://doi.org/10.12688/gatesopenres.13122.1.

    Tantowijoyo W., Andari B., Arguni E., Budiwati N., Nurhayati I., et al. (2020). Stable establishment of wMel Wolbachia in Aedes aegypti populations in Yogyakarta, Indonesia. PLOS Neglected Tropical Diseases 14, 4. https://doi.org/10.1371/journal.pntd.0008157

    Anders, K.L., Indriani, C., Ahmad, R.A. et al. (2020). Update to the AWED (Applying Wolbachia to Eliminate Dengue) trial study protocol: a cluster randomised controlled trial in Yogyakarta, Indonesia. Trials 21, 429. https://doi.org/10.1186/s13063-020-04367-2.

    Kumalawati, D.A., Supriyati, E., Rachman, M.P., Oktriani, R., Kurniasari. I., Candrasari, D.S., Hidayati, L., Handayaningsih, A.E., Probowati, V.C., Arianto, B., Wardana, D.S., Pramuko, N.B., Utari, A., Tantowijoyo, W., Arguni, E. (2020). Wolbachia infection prevalence as common insects’ endosymbiont in the rural area of Yogyakarta, Indonesia. Biodiversitas 21, 5608-5614. https://doi.org/10.13057/biodiv/d211216.

    Alonge, O., Neel, A.H., Kalbarczyk, A. et al. (2020). Synthesis and translation of research and innovations from polio eradication (STRIPE): initial findings from a global mixed methods study. BMC Public Health 20, 1176. https://doi.org/10.1186/s12889-020-09156-9.

    Kalbarczyk, A., Rao, A., Mahendradhata, Y. et al. (2020). Evaluating the process of partnership and research in global health: reflections from the STRIPE project. BMC Public Health 20, 1058. https://doi.org/10.1186/s12889-020-08591-y.

    Peters, M.A., Deressa, W., Sarker, M. et al. (2020). Sampling method for surveying complex and multi-institutional partnerships: lessons from the Global Polio Eradication Initiative. BMC Public Health 20, 1197. https://doi.org/10.1186/s12889-020-08592-x.
    Surendra, H., Supargiyono, Ahmad, R.A. et al. (2020). Using health facility-based serological surveillance to predict receptive areas at risk of malaria outbreaks in elimination areas. BMC Med 18, 9. https://doi.org/10.1186/s12916-019-1482-7.
    Subronto Y.W., Kusmayanti N.A., Abdalla A.S., Sattwika P.D. (2020). Nevirapine and tuberculosis predict first-line treatment failure in HIV patients in Indonesia: Case-control study. Ann Med Surg (Lond) 60, 56-60. doi: 10.1016/j.amsu.2020.10.005.
    Hertanti N.S., Huang MC., Chang C.M., Fetzer S.J., Kao C.Y. (2020). Knowledge and comfort related to palliative care among Indonesian primary health care providers. Aust J Prim Health 26, 6. doi: 10.1071/PY20111. PMID: 33292928.
    Nur, D.N., Andono, R.A., Tunas, A.W., Wiku,A., Haniena D., Andrew C. H., Zisis, K. (2020). Knowledge, Attitudes, and Behaviors on Utilizing Mobile Health Technology for TB in Indonesia: A Qualitative Pilot Study. Frontiers in Public Health 8, 579. DOI=10.3389/fpubh.2020.531514.
    Kridaningsih, T.N., Sukmana, D.J., Mufidah, H., Diptyanusa, A., Kusumasari, A.A., Burdam F.H., Kenangalem, E., Poespoprodjo, J.R., Fuad, A., Mahendradhata, Y., Supargiyono, S., Utzinger, J., Becker, S.L., E. Murhandarwati, E.H. (2020). Epidemiology and risk factors of Strongyloides stercoralis infection in Papua, Indonesia: a molecular diagnostic study. Acta Tropica 209, 105575. https://doi.org/10.1016/j.actatropica.2020.105575.
    Gyem, K., Ahmad, R.A., Mahendradhata, Y. (2020). Implementation fidelity of tuberculosis infection prevention and control practices in three hospitals with the highest notified tuberculosis cases in Bhutan: a mixed method study. Journal of Global Health Reports 4. doi:10.29392/001c.14140
    Dorji, K., Lestari, T., Jamtsho, S. et al. (2020). Implementation fidelity of hospital based directly observed therapy for tuberculosis treatment in Bhutan: mixed-method study. BMC Public Health 20, 533. https://doi.org/10.1186/s12889-020-08666-w
    Hermawan, B., Paramita, D.K., Rahayujati, T.B., Hartati, D., Fachiroh, J. (2020). Smoking is associated with IgA-EBV titer among healthy male in Yogyakarta, Indonesia. Malaysian Journal of Medicine and Health Science, 16(SUPP15), 6-10.
    Murhandarwati, E.E.H, Herningtyas, E.H., Puspawati, P., Mau, F., Chen, S.B., Shen, H.M., Chen, J.H. (2020). Genetic diversity of Merozoite surface protein 1-42 (MSP1-42) fragment of Plasmodium vivax from Indonesian isolates: Rationale implementation of candidate MSP1 vaccine. Infect Genet Evol, 85, 104573. doi: 10.1016/j.meegid.2020.104573.
    Utami, W. S., Murhandarwati, E. H., Artama, W. T., & Kusnanto, H. (2020). Cryptosporidium Infection Increases the Risk for Chronic Diarrhea Among People Living With HIV in Southeast Asia: A Systematic Review and Meta-Analysis. Asia Pacific Journal of Public Health, 32(1), 8–18. https://doi.org/10.1177/1010539519895422.
    Margineanu, I., Louka, C., Vincenti-Gonzalez, M., Saktiawati, A., Schierle, J., Abass, K. M., Akkerman, O., Alffenaar, J. W., Ranchor, A. V., & Stienstra, Y. (2020). Patients and Medical Staff Attitudes Toward the Future Inclusion of eHealth in Tuberculosis Management: Perspectives From Six Countries Evaluated using a Qualitative Framework. JMIR mHealth and uHealth, 8(11), e18156. https://doi.org/10.2196/18156
    Sriwahyuni, E., Fuad, A., Ahmad, R.A., Rustamaji, R., Gunadi, Herini, E.S. (2020). Spatiotemporal proximity of rubella cases to the occurrence of congenital rubella syndrome in Yogyakarta, Indonesia. Med J Malaysia. May;75(Suppl 1), 41-47. PMID: 32483106.